Granted that the Muslims in India are just 13% of the population (160.9 million per 2009 estimate according to two sources: CIA Factbook and India Census 2009). But if you look at the figure, how can anyone (or any longer) call them a minority community? Call them vilified, oppressed, ignored or whatever else. But minority they are not. They are the size of an average country by themselves.
Parsis, Jews, Jains and so on can be the new, true minority communities.